BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C10LP1|AL429879
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1276 1682 0.0
>3x_Contig1276
Length = 6662
Score = 1682 bits (847), Expect = 0.0
Identities = 858/863 (99%)
Strand = Plus / Plus
Query: 1 gatcagcgtattcaccgatgcaccaaatcgagacaactctccatgctaaattttcgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2685 gatcagcgtattcaccgatgcaccaaatcgagacaactctccatgctaaattttcgtctg 2744
Query: 61 agaattggctagagtcattatccaatgctacgttgataatgttagaaaccacttgcttct 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 agacttggctagagtcattatccaatgctacgttgataatgttagaaaccacttgcttct 2804
Query: 121 tatgttccaggttcgaattattgttaatcataattaatgcatcagtagtcttctcaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 tatgttccaggttcgaattattgttaatcataattaatgcatcagtagtcttctcaactg 2864
Query: 181 aaatatattggccaacaaatttcaatattttaactatgacatccagtttccaggaatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2865 aaatatattggccaacaaatttcaatattttaactatgacatccagtttccaggaatcat 2924
Query: 241 ctatttcatcttgaagatcgaaaaccattataagttgatctacacagtacaatattagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2925 ctatttcatcttgaagatcgaaaaccattataagttgatctacacagtacaatattagtc 2984
Query: 301 ctttatcgttttctcctgctttttctaagaacgtaagaatctctgcgatcaattccctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2985 ctttatcgttttctcctgctttttctaagaacgtaagaatctctgcgatcaattccctca 3044
Query: 361 tatttgtttggtttaaaattgcgaacgtcatctcaagagccctctttttgattgaaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3045 tatttgtttggtttaaaattgcgaacgtcatctcaagagccctctttttgattgaaatat 3104
Query: 421 cagaatcaaagatacaacgtgagaaaaactttctatgcctttggaccgcctgtggctcta 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3105 cagaatcaaagatacaacgtgagataaactttctatgcctttggaccgcctgtggctcta 3164
Query: 481 ccgaaacaacatctaacaatgcgtttaatgaaacatattttgtgttgtaatccttgtctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3165 ccgaaacaacatctaacaatgcgtttaatgaaacatattttgtgttgtaatccttgtctg 3224
Query: 541 cmactagattacccaacacgttgacacctagtactctcaaggagcgctctgcttggaatg 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3225 caactagattacccaacacgttgacacctagtactctcaaggagcgctctgcttggaatg 3284
Query: 601 aaaaaatagtgcgcactgcctcgtataagactgaagtacaactattcgaagtagttggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3285 aaaaaatagtgcgcactgcctcgtataagactgaagtacaactattcgaagtagttggag 3344
Query: 661 tgtaagttgcaactcgggtcaatgtatccmagtagttattcttgtaaggcttagtttgct 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3345 tgtaagttgcaactcgggtcaatgtatccaagtagttattcttgtaaggcttagtttgct 3404
Query: 721 cagggaagtactgcaagaacaaacgtaatgtagttatgagttcgacttgtaaaaatggat 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3405 cagggaagtactgcaagaacaaacgtaatgtagtcatgagttcgacttgtaaaaatggat 3464
Query: 781 cgagacaaccgccaacgttatattctgggttggacgatcctaaattcaaatggtgtagtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3465 cgagacaaccgccaacgttatattctgggttggacgatcctaaattcaaatggtgtagtt 3524
Query: 841 ttcctaagagatcaggtatcaag 863
|||||||||||||||||||||||
Sbjct: 3525 ttcctaagagatcaggtatcaag 3547
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6171
Number of Sequences: 1807
Number of extensions: 6171
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)